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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs11704032 chr22:19400094 C/T 2.22E-9 406 15.63 14.95 3.2 KM Plot
LGG rs117050421 chr7:55925124 G/A 0 404 15.25 15.93 3.77 KM Plot
LGG rs117153458 chr7:55943854 G/T 6.73E-5 405 15.25 15.37 5.88 KM Plot
LGG rs11729591 chr4:84612373 A/G 8.88E-16 400 15.37 11.83 5.17 KM Plot
LGG rs117309978 chr8:1726374 G/A 1.46E-9 399 15.27 15.22 6.47 KM Plot
LGG rs117315664 chr9:95460709 T/C 0.000148 407 15.17 17.7 7.12 KM Plot
LGG rs11739522 chr5:156021278 T/C 4.79E-5 406 16.75 13.78 10.53 KM Plot
LGG rs117428406 chr9:95493037 T/C 0.000148 407 15.17 17.7 7.12 KM Plot
LGG rs117450449 chr7:55944100 C/T 6.73E-5 405 15.25 15.37 5.88 KM Plot
LGG rs11750620 chr5:155969162 A/G 5.16E-6 406 15.45 15.17 15.37 KM Plot
LGG rs117508389 chr9:95528119 C/A 0.000155 406 15.17 17.7 7.12 KM Plot
LGG rs117508471 chr20:3338438 C/T 1.02E-7 406 15.97 11.55 6.83 KM Plot
LGG rs117512627 chr9:95525116 G/A 0.000135 405 15.17 17.23 7.12 KM Plot
LGG rs117544425 chr17:48607813 G/A 6.13E-5 406 15.18 17.43 4.1 KM Plot
LGG rs11757455 chr6:112522852 A/G 5.24E-10 407 6.47 13.42 15.6 KM Plot